Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 RPSAP43-201ENST00000402237 625 ntBASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 AC098859.1-201ENST00000502915 1238 ntBASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 AC243562.1-201ENST00000560672 389 ntBASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 AC027307.2-201ENST00000591252 911 ntBASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 SPTSSB-204ENST00000617024 1292 ntBASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 AL691432.1-201ENST00000596308 1422 ntBASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 AL136982.4-201ENST00000437689 1740 ntBASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERPUD2Q9BSE4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 MIR4313-201ENST00000580760 101 ntBASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 TMBIM7P-203ENST00000641617 1718 ntBASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 AC023157.3-201ENST00000619086 2088 ntBASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HERPUD2Q9BSE4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HERPUD2Q9BSE4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms