Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 AC092127.1-201ENST00000567093 3455 ntBASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 LINC00982-205ENST00000420957 435 ntBASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 AC142381.4-202ENST00000563973 229 ntBASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 AL441883.1-201ENST00000566170 1045 ntBASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 MIR4785-201ENST00000585005 73 ntBASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 LINC01230-201ENST00000625222 3017 ntBASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SEC22CQ9BRL7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 AC090192.1-201ENST00000517740 490 ntBASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SEC22CQ9BRL7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC22CQ9BRL7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms