Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ABCA3Q99758 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.89■□□□□ 0.93
ABCA3Q99758 RNF216P1-203ENST00000404404 2427 ntBASIC20.89■□□□□ 0.93
ABCA3Q99758 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCA3Q99758 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCA3Q99758 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ABCA3Q99758 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC20.89■□□□□ 0.93
ABCA3Q99758 FAM8A4P-201ENST00000435433 1213 ntBASIC20.89■□□□□ 0.93
ABCA3Q99758 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.89■□□□□ 0.93
ABCA3Q99758 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.89■□□□□ 0.93
ABCA3Q99758 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC20.89■□□□□ 0.93
ABCA3Q99758 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCA3Q99758 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ABCA3Q99758 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ABCA3Q99758 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.89■□□□□ 0.93
ABCA3Q99758 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ABCA3Q99758 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
ABCA3Q99758 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20.88■□□□□ 0.93
ABCA3Q99758 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.88■□□□□ 0.93
ABCA3Q99758 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 ZACNP1-201ENST00000612259 710 ntBASIC20.88■□□□□ 0.93
ABCA3Q99758 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA3Q99758 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.88■□□□□ 0.93
ABCA3Q99758 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 AC024681.1-201ENST00000521917 487 ntBASIC20.87■□□□□ 0.93
ABCA3Q99758 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC20.87■□□□□ 0.93
ABCA3Q99758 AC022748.3-201ENST00000621828 275 ntBASIC20.87■□□□□ 0.93
ABCA3Q99758 AP001002.3-201ENST00000623482 206 ntBASIC20.87■□□□□ 0.93
ABCA3Q99758 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ABCA3Q99758 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ABCA3Q99758 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC20.87■□□□□ 0.93
ABCA3Q99758 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCA3Q99758 IQSEC3P1-201ENST00000538799 536 ntBASIC20.87■□□□□ 0.93
ABCA3Q99758 AC103988.2-201ENST00000561804 725 ntBASIC20.87■□□□□ 0.93
ABCA3Q99758 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ABCA3Q99758 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCA3Q99758 ENPP7P14-201ENST00000621765 1040 ntBASIC20.87■□□□□ 0.93
ABCA3Q99758 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCA3Q99758 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ABCA3Q99758 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ABCA3Q99758 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ABCA3Q99758 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ABCA3Q99758 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCA3Q99758 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ABCA3Q99758 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 KRT8P14-201ENST00000414254 1442 ntBASIC20.86■□□□□ 0.93
ABCA3Q99758 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ABCA3Q99758 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
ABCA3Q99758 MIR4783-201ENST00000580343 82 ntBASIC20.86■□□□□ 0.93
ABCA3Q99758 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ABCA3Q99758 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 AL138799.1-201ENST00000448213 1675 ntBASIC20.86■□□□□ 0.93
ABCA3Q99758 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCA3Q99758 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCA3Q99758 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCA3Q99758 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ABCA3Q99758 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCA3Q99758 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.85■□□□□ 0.93
ABCA3Q99758 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms