Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LITAFQ99732 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 SPDYE13P-201ENST00000445314 798 ntBASIC10.73□□□□□ -0.69
LITAFQ99732 KRT18P38-201ENST00000449496 1282 ntBASIC10.73□□□□□ -0.69
LITAFQ99732 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC10.73□□□□□ -0.69
LITAFQ99732 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC10.73□□□□□ -0.69
LITAFQ99732 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC10.73□□□□□ -0.69
LITAFQ99732 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC10.73□□□□□ -0.69
LITAFQ99732 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC10.73□□□□□ -0.69
LITAFQ99732 AC090616.6-201ENST00000582640 721 ntBASIC10.73□□□□□ -0.69
LITAFQ99732 AP001350.2-201ENST00000625104 1094 ntBASIC10.73□□□□□ -0.69
LITAFQ99732 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
LITAFQ99732 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC10.73□□□□□ -0.69
LITAFQ99732 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC10.73□□□□□ -0.69
LITAFQ99732 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC10.73□□□□□ -0.69
LITAFQ99732 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.73□□□□□ -0.69
LITAFQ99732 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.73□□□□□ -0.69
LITAFQ99732 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LITAFQ99732 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.72□□□□□ -0.69
LITAFQ99732 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
LITAFQ99732 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.72□□□□□ -0.69
LITAFQ99732 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC10.72□□□□□ -0.69
LITAFQ99732 TSPY22P-201ENST00000427496 604 ntBASIC10.72□□□□□ -0.69
LITAFQ99732 AC245100.5-201ENST00000452108 331 ntBASIC10.72□□□□□ -0.69
LITAFQ99732 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC10.72□□□□□ -0.69
LITAFQ99732 USP36-216ENST00000589424 970 ntTSL 5 BASIC10.72□□□□□ -0.69
LITAFQ99732 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC10.72□□□□□ -0.69
LITAFQ99732 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 LINC01568-207ENST00000641790 1380 ntBASIC10.72□□□□□ -0.69
LITAFQ99732 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LITAFQ99732 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LITAFQ99732 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.72□□□□□ -0.69
LITAFQ99732 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LITAFQ99732 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC10.72□□□□□ -0.69
LITAFQ99732 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LITAFQ99732 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
LITAFQ99732 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LITAFQ99732 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
LITAFQ99732 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms