Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 AL391005.1-201ENST00000623953 2435 ntBASIC13.51□□□□□ -0.25
CCL13Q99616 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL13Q99616 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL13Q99616 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CCL13Q99616 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCL13Q99616 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCL13Q99616 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCL13Q99616 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCL13Q99616 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCL13Q99616 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 MIR648-201ENST00000385046 94 ntBASIC13.5□□□□□ -0.25
CCL13Q99616 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL13Q99616 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 CNN2P2-201ENST00000443536 909 ntBASIC13.5□□□□□ -0.25
CCL13Q99616 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL13Q99616 CNN2P3-201ENST00000450201 906 ntBASIC13.5□□□□□ -0.25
CCL13Q99616 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL13Q99616 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.5□□□□□ -0.25
CCL13Q99616 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL13Q99616 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL13Q99616 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 AL136317.3-201ENST00000618497 906 ntBASIC13.5□□□□□ -0.25
CCL13Q99616 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL13Q99616 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
CCL13Q99616 AL513523.2-202ENST00000427283 2040 ntBASIC13.5□□□□□ -0.25
CCL13Q99616 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCL13Q99616 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL13Q99616 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL13Q99616 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL13Q99616 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL13Q99616 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL13Q99616 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL13Q99616 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCL13Q99616 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 AC008741.2-201ENST00000612792 3115 ntBASIC13.49□□□□□ -0.25
CCL13Q99616 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CCL13Q99616 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
CCL13Q99616 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CCL13Q99616 TUBB3P1-201ENST00000405796 1332 ntBASIC13.49□□□□□ -0.25
CCL13Q99616 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL13Q99616 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CCL13Q99616 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCL13Q99616 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL13Q99616 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL13Q99616 MTND6P24-201ENST00000440466 518 ntBASIC13.49□□□□□ -0.25
CCL13Q99616 AC245100.5-201ENST00000452108 331 ntBASIC13.49□□□□□ -0.25
CCL13Q99616 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL13Q99616 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL13Q99616 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.49□□□□□ -0.25
CCL13Q99616 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL13Q99616 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL13Q99616 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL13Q99616 AC105021.1-202ENST00000570572 669 ntBASIC13.49□□□□□ -0.25
CCL13Q99616 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 AC026979.3-201ENST00000607315 403 ntBASIC13.49□□□□□ -0.25
CCL13Q99616 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL13Q99616 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms