Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
EYA3Q99504 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 AC026471.1-201ENST00000564629 3026 ntBASIC19.4■□□□□ 0.7
EYA3Q99504 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
EYA3Q99504 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
EYA3Q99504 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.4■□□□□ 0.7
EYA3Q99504 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EYA3Q99504 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 RPL7P3-201ENST00000441388 714 ntBASIC19.4■□□□□ 0.7
EYA3Q99504 AL355994.2-201ENST00000447882 704 ntBASIC19.4■□□□□ 0.7
EYA3Q99504 CSF2RBP1-201ENST00000447905 391 ntBASIC19.4■□□□□ 0.7
EYA3Q99504 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.4■□□□□ 0.7
EYA3Q99504 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EYA3Q99504 AP001889.1-201ENST00000525414 633 ntBASIC19.4■□□□□ 0.7
EYA3Q99504 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.4■□□□□ 0.7
EYA3Q99504 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.4■□□□□ 0.7
EYA3Q99504 AC009486.1-201ENST00000569860 813 ntBASIC19.4■□□□□ 0.7
EYA3Q99504 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.4■□□□□ 0.7
EYA3Q99504 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.4■□□□□ 0.7
EYA3Q99504 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.4■□□□□ 0.7
EYA3Q99504 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EYA3Q99504 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EYA3Q99504 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EYA3Q99504 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EYA3Q99504 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
EYA3Q99504 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
EYA3Q99504 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EYA3Q99504 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EYA3Q99504 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EYA3Q99504 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EYA3Q99504 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.4■□□□□ 0.7
EYA3Q99504 AC022211.2-201ENST00000585075 2527 ntBASIC19.4■□□□□ 0.7
EYA3Q99504 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
EYA3Q99504 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.39■□□□□ 0.7
EYA3Q99504 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
EYA3Q99504 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
EYA3Q99504 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EYA3Q99504 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.39■□□□□ 0.69
EYA3Q99504 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
EYA3Q99504 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.39■□□□□ 0.69
EYA3Q99504 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.39■□□□□ 0.69
EYA3Q99504 C1QBPP1-201ENST00000400117 770 ntBASIC19.39■□□□□ 0.69
EYA3Q99504 MIR1908-201ENST00000410394 80 ntBASIC19.39■□□□□ 0.69
EYA3Q99504 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.39■□□□□ 0.69
EYA3Q99504 FAM21FP-201ENST00000426241 1131 ntBASIC19.39■□□□□ 0.69
EYA3Q99504 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.39■□□□□ 0.69
EYA3Q99504 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.39■□□□□ 0.69
EYA3Q99504 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.39■□□□□ 0.69
EYA3Q99504 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.39■□□□□ 0.69
EYA3Q99504 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.39■□□□□ 0.69
EYA3Q99504 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EYA3Q99504 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.39■□□□□ 0.69
EYA3Q99504 AL049840.4-201ENST00000602422 811 ntBASIC19.39■□□□□ 0.69
EYA3Q99504 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.39■□□□□ 0.69
EYA3Q99504 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
EYA3Q99504 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.39■□□□□ 0.69
EYA3Q99504 AL133338.1-201ENST00000565695 1517 ntBASIC19.39■□□□□ 0.69
EYA3Q99504 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.39■□□□□ 0.69
EYA3Q99504 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.39■□□□□ 0.69
EYA3Q99504 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.39■□□□□ 0.69
EYA3Q99504 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EYA3Q99504 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.38■□□□□ 0.69
EYA3Q99504 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EYA3Q99504 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
EYA3Q99504 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.38■□□□□ 0.69
EYA3Q99504 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 BRWD1P1-201ENST00000401091 371 ntBASIC19.38■□□□□ 0.69
EYA3Q99504 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.38■□□□□ 0.69
EYA3Q99504 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.38■□□□□ 0.69
EYA3Q99504 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.38■□□□□ 0.69
EYA3Q99504 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EYA3Q99504 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
EYA3Q99504 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms