Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 AC026410.3-201ENST00000514280 936 ntBASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5RAP2Q96SN8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 HLA-V-201ENST00000429037 534 ntBASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 AL512343.1-201ENST00000605837 169 ntBASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5RAP2Q96SN8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 AC104989.1-201ENST00000519711 778 ntBASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 TDH-203ENST00000531764 1110 ntBASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 AC025279.2-201ENST00000569730 653 ntBASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK5RAP2Q96SN8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 AL355864.2-201ENST00000447420 863 ntBASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms