Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 ME2P1-201ENST00000426028 1970 ntBASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 C2orf69P2-201ENST00000562032 1123 ntBASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 AC025279.2-201ENST00000569730 653 ntBASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 AC068587.10-201ENST00000641210 219 ntBASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 LTB4R2-202ENST00000528054 3092 ntBASIC19.43■□□□□ 0.7
CRAMP1Q96RY5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CRAMP1Q96RY5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 AC006001.1-201ENST00000325130 474 ntBASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 GOLGA2P4-201ENST00000441462 777 ntBASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 AC023310.1-201ENST00000554836 735 ntBASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 AC015910.1-201ENST00000579400 975 ntBASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 AC243960.2-201ENST00000600996 747 ntBASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 AC107373.2-201ENST00000607735 490 ntBASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 AC091271.1-201ENST00000611877 1162 ntBASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.41■□□□□ 0.7
CRAMP1Q96RY5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms