Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 AP001282.1-201ENST00000531301 1499 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 MIR648-201ENST00000385046 94 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 TSSK5P-201ENST00000423978 907 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 RN7SL618P-201ENST00000477850 296 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 ZNF890P-202ENST00000530367 1156 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 MIR3197-201ENST00000582241 73 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 AC022144.1-201ENST00000602255 1580 ntBASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
UBE2E2Q96LR5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 AL136982.4-201ENST00000437689 1740 ntBASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 AC009053.2-201ENST00000563701 2365 ntBASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 AL033527.5-202ENST00000641632 1098 ntBASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2E2Q96LR5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
UBE2E2Q96LR5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
UBE2E2Q96LR5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
UBE2E2Q96LR5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBE2E2Q96LR5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
UBE2E2Q96LR5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.46□□□□□ -0.42
UBE2E2Q96LR5 MIR600HG-201ENST00000449175 5984 ntBASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms