Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 FAM210CP-201ENST00000445714 574 ntBASIC15.52■□□□□ 0.08
CLPTM1LQ96KA5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLPTM1LQ96KA5 KRT18P21-201ENST00000515767 1272 ntBASIC15.52■□□□□ 0.08
CLPTM1LQ96KA5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.52■□□□□ 0.08
CLPTM1LQ96KA5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 FGD5P1-202ENST00000614866 2498 ntBASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.52■□□□□ 0.07
CLPTM1LQ96KA5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 AC233702.3-201ENST00000578656 1387 ntBASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 AC015656.1-201ENST00000624209 3578 ntBASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 BX005266.1-201ENST00000473402 457 ntBASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1LQ96KA5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 HAUS4P1-201ENST00000406739 1145 ntBASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 AC026396.1-201ENST00000419388 421 ntBASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 AL671277.2-201ENST00000458060 996 ntBASIC15.5■□□□□ 0.07
CLPTM1LQ96KA5 SLC25A6P2-201ENST00000497974 877 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms