Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHCHD1Q96BP2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 HLA-F-220ENST00000434407 884 ntBASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 MIR4492-201ENST00000581627 80 ntBASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 TERC-201ENST00000602385 541 ntBASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 BX640514.1-201ENST00000583223 1918 ntBASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 AC107918.4-201ENST00000641966 3141 ntBASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHCHD1Q96BP2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms