Protein–RNA interactions for Protein: Q969F1

GTF3C6, General transcription factor 3C polypeptide 6, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6Q969F1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 BNIP3P1-202ENST00000550043 1585 ntBASIC18.82■□□□□ 0.6
GTF3C6Q969F1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 RPS8P6-201ENST00000426177 609 ntBASIC18.82■□□□□ 0.6
GTF3C6Q969F1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 AC243562.2-201ENST00000561247 970 ntBASIC18.82■□□□□ 0.6
GTF3C6Q969F1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF3C6Q969F1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.81■□□□□ 0.6
GTF3C6Q969F1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 AL136982.4-201ENST00000437689 1740 ntBASIC18.81■□□□□ 0.6
GTF3C6Q969F1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 HLA-H-201ENST00000383620 1096 ntBASIC18.81■□□□□ 0.6
GTF3C6Q969F1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 AC013268.4-201ENST00000637413 2228 ntBASIC18.81■□□□□ 0.6
GTF3C6Q969F1 AC073347.1-201ENST00000421633 2643 ntBASIC18.81■□□□□ 0.6
GTF3C6Q969F1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 PPT1-215ENST00000641471 2368 ntBASIC18.81■□□□□ 0.6
GTF3C6Q969F1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.81■□□□□ 0.6
GTF3C6Q969F1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 AC022532.1-201ENST00000624563 1728 ntBASIC18.8■□□□□ 0.6
GTF3C6Q969F1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 AC018892.3-201ENST00000623986 2499 ntBASIC18.8■□□□□ 0.6
GTF3C6Q969F1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 AC020658.6-201ENST00000623564 1870 ntBASIC18.8■□□□□ 0.6
GTF3C6Q969F1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 IGHV3-62-201ENST00000520057 340 ntBASIC18.8■□□□□ 0.6
GTF3C6Q969F1 SLC25A39P2-201ENST00000537614 270 ntBASIC18.8■□□□□ 0.6
GTF3C6Q969F1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 ELL2P1-201ENST00000413990 1906 ntBASIC18.8■□□□□ 0.6
GTF3C6Q969F1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF3C6Q969F1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms