Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
AP3S1Q92572 AGAP7P-201ENST00000582299 2062 ntBASIC14.26□□□□□ -0.13
AP3S1Q92572 AGAP14-201ENST00000624701 2060 ntBASIC14.26□□□□□ -0.13
AP3S1Q92572 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 AC011477.6-201ENST00000604980 1927 ntBASIC14.25□□□□□ -0.13
AP3S1Q92572 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S1Q92572 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 LINC01568-207ENST00000641790 1380 ntBASIC14.25□□□□□ -0.13
AP3S1Q92572 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AP3S1Q92572 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 HAUS4P1-201ENST00000406739 1145 ntBASIC14.25□□□□□ -0.13
AP3S1Q92572 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.25□□□□□ -0.13
AP3S1Q92572 VENTXP7-201ENST00000475503 772 ntBASIC14.25□□□□□ -0.13
AP3S1Q92572 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.25□□□□□ -0.13
AP3S1Q92572 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.25□□□□□ -0.13
AP3S1Q92572 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 VENTXP5-201ENST00000523979 775 ntBASIC14.25□□□□□ -0.13
AP3S1Q92572 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.25□□□□□ -0.13
AP3S1Q92572 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.25□□□□□ -0.13
AP3S1Q92572 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S1Q92572 CYP2A7P1-201ENST00000595391 815 ntBASIC14.25□□□□□ -0.13
AP3S1Q92572 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S1Q92572 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.25□□□□□ -0.13
AP3S1Q92572 C18orf15-201ENST00000623680 2534 ntBASIC14.25□□□□□ -0.13
AP3S1Q92572 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AP3S1Q92572 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
AP3S1Q92572 AC112693.3-201ENST00000624819 1983 ntBASIC14.25□□□□□ -0.13
AP3S1Q92572 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
AP3S1Q92572 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S1Q92572 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
AP3S1Q92572 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
AP3S1Q92572 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.25□□□□□ -0.13
AP3S1Q92572 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S1Q92572 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
AP3S1Q92572 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.25□□□□□ -0.13
AP3S1Q92572 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S1Q92572 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S1Q92572 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.24□□□□□ -0.13
AP3S1Q92572 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.24□□□□□ -0.13
AP3S1Q92572 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S1Q92572 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S1Q92572 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S1Q92572 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
AP3S1Q92572 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 AL845331.1-201ENST00000424978 1190 ntBASIC14.24□□□□□ -0.13
AP3S1Q92572 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.24□□□□□ -0.13
AP3S1Q92572 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.24□□□□□ -0.13
AP3S1Q92572 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S1Q92572 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.24□□□□□ -0.13
AP3S1Q92572 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.24□□□□□ -0.13
AP3S1Q92572 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
AP3S1Q92572 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 AC091951.1-201ENST00000512854 2465 ntBASIC14.24□□□□□ -0.13
AP3S1Q92572 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms