Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 AL590787.1-201ENST00000568856 1315 ntBASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 PRSS29P-201ENST00000440800 595 ntBASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 AC108073.2-201ENST00000464002 357 ntBASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 MIR4751-201ENST00000578027 74 ntBASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 AC092919.2-201ENST00000623631 1645 ntBASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 KRT18P13-201ENST00000400056 1290 ntBASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 MRPL20P1-201ENST00000400819 433 ntBASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 PGAM5P1-201ENST00000518923 814 ntBASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 AC040169.1-201ENST00000565382 521 ntBASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 AC064836.3-201ENST00000607928 673 ntBASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 AC004790.2-201ENST00000623588 572 ntBASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB40AQ8WXH6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms