Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 ACTG1P17-201ENST00000558391 1119 ntBASIC19.28■□□□□ 0.68
SNED1Q8TER0 AC105129.2-201ENST00000559536 390 ntBASIC19.28■□□□□ 0.68
SNED1Q8TER0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 AP001282.1-201ENST00000531301 1499 ntBASIC19.28■□□□□ 0.68
SNED1Q8TER0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 AC092171.3-201ENST00000610122 2651 ntBASIC19.28■□□□□ 0.68
SNED1Q8TER0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNED1Q8TER0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SNED1Q8TER0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SNED1Q8TER0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.27■□□□□ 0.68
SNED1Q8TER0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 AGGF1P2-201ENST00000426656 2106 ntBASIC19.27■□□□□ 0.68
SNED1Q8TER0 Z93015.1-201ENST00000451718 390 ntBASIC19.27■□□□□ 0.68
SNED1Q8TER0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.27■□□□□ 0.68
SNED1Q8TER0 AC091804.1-201ENST00000486888 567 ntBASIC19.27■□□□□ 0.68
SNED1Q8TER0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.27■□□□□ 0.68
SNED1Q8TER0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.27■□□□□ 0.68
SNED1Q8TER0 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.27■□□□□ 0.68
SNED1Q8TER0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.27■□□□□ 0.68
SNED1Q8TER0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 FLJ38576-201ENST00000623820 2459 ntBASIC19.27■□□□□ 0.68
SNED1Q8TER0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.27■□□□□ 0.68
SNED1Q8TER0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNED1Q8TER0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SNED1Q8TER0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.27■□□□□ 0.68
SNED1Q8TER0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNED1Q8TER0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SNED1Q8TER0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.27■□□□□ 0.67
SNED1Q8TER0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 REXO1L1P-202ENST00000608646 1974 ntBASIC19.26■□□□□ 0.67
SNED1Q8TER0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 AC011676.5-201ENST00000624864 2660 ntBASIC19.26■□□□□ 0.67
SNED1Q8TER0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.26■□□□□ 0.67
SNED1Q8TER0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 AC134407.2-201ENST00000625089 1978 ntBASIC19.26■□□□□ 0.67
SNED1Q8TER0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNED1Q8TER0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SNED1Q8TER0 AC018735.1-201ENST00000437208 1502 ntBASIC19.26■□□□□ 0.67
SNED1Q8TER0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms