Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DNAAF1Q8NEP3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DNAAF1Q8NEP3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DNAAF1Q8NEP3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.26□□□□□ -0.13
DNAAF1Q8NEP3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
DNAAF1Q8NEP3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 MIR648-201ENST00000385046 94 ntBASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DNAAF1Q8NEP3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 AC005622.1-201ENST00000636801 1703 ntBASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 SSR4P1-203ENST00000599569 2260 ntBASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 MRPL20P1-201ENST00000400819 433 ntBASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 DUSP5P1-201ENST00000441325 1139 ntBASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 AL356488.2-201ENST00000602755 427 ntBASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 AC005593.1-201ENST00000624894 515 ntBASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms