Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 AC018529.1-201ENST00000613063 361 ntBASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 MIR6080-201ENST00000617359 66 ntBASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 AC139530.3-201ENST00000620344 690 ntBASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF2Q8N5M1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 AC112504.1-201ENST00000623415 1841 ntBASIC16.52■□□□□ 0.23
ATPAF2Q8N5M1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 AC134407.2-201ENST00000625089 1978 ntBASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 AC003101.2-201ENST00000612557 442 ntBASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF2Q8N5M1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 TSEN15P1-201ENST00000423257 515 ntBASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 AL139010.1-201ENST00000454878 894 ntBASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 AP001059.3-201ENST00000619053 235 ntBASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 LINC00628-201ENST00000628516 1289 ntBASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms