Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 SERBP1P5-201ENST00000510079 1181 ntBASIC14.99□□□□□ -0.01
BEST3Q8N1M1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 AC190387.1-201ENST00000551683 408 ntBASIC14.99□□□□□ -0.01
BEST3Q8N1M1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 AL079307.3-201ENST00000556114 283 ntBASIC14.99□□□□□ -0.01
BEST3Q8N1M1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 AC061975.2-201ENST00000581722 295 ntBASIC14.99□□□□□ -0.01
BEST3Q8N1M1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
BEST3Q8N1M1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 LINC01144-201ENST00000626198 1710 ntBASIC14.98□□□□□ -0.01
BEST3Q8N1M1 AC005622.1-201ENST00000636801 1703 ntBASIC14.98□□□□□ -0.01
BEST3Q8N1M1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.98□□□□□ -0.01
BEST3Q8N1M1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST3Q8N1M1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 AC087499.5-201ENST00000452760 1342 ntBASIC14.97□□□□□ -0.01
BEST3Q8N1M1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST3Q8N1M1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms