Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AC148477.4-201ENST00000613430 1793 ntBASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AC011676.5-201ENST00000624864 2660 ntBASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AP006547.1-201ENST00000563435 692 ntBASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 MIR4313-201ENST00000580760 101 ntBASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AC006453.4-201ENST00000636949 1252 ntBASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL27A1Q8IZC6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 HOMER2P2-201ENST00000451621 847 ntBASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 Z93015.1-201ENST00000451718 390 ntBASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 MIR4741-201ENST00000579822 90 ntBASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL27A1Q8IZC6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 EIF3FP3-201ENST00000434851 1086 ntBASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 KRT18P25-201ENST00000508931 1278 ntBASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 AC073413.1-201ENST00000603927 732 ntBASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms