Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 AC073439.1-201ENST00000624121 1774 ntBASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC170Q8IYT3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 FAM197Y8-203ENST00000450145 560 ntBASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 IFNL4P1-201ENST00000607083 540 ntBASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 AC117500.6-201ENST00000624871 588 ntBASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC170Q8IYT3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 GPX1P2-201ENST00000429271 606 ntBASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 MIR4751-201ENST00000578027 74 ntBASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC170Q8IYT3 AC134407.2-201ENST00000625089 1978 ntBASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC170Q8IYT3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms