Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA11Q86Y39 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA11Q86Y39 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA11Q86Y39 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA11Q86Y39 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NDUFA11Q86Y39 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA11Q86Y39 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NDUFA11Q86Y39 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 DGCR5-201ENST00000399539 862 ntBASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 AL512384.1-201ENST00000406683 331 ntBASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 GIMAP3P-201ENST00000495150 836 ntBASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 MEIS3P1-201ENST00000495167 958 ntBASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 SRD5A3P1-201ENST00000603021 949 ntBASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 AC008494.3-201ENST00000606615 944 ntBASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 AC099568.2-201ENST00000609194 695 ntBASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 AC007431.3-201ENST00000623221 587 ntBASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA11Q86Y39 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 AC105020.1-201ENST00000435356 2205 ntBASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 PKD1P5-201ENST00000532415 10291 ntBASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 FO393414.2-201ENST00000405153 598 ntBASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 INE1-201ENST00000456273 945 ntBASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA11Q86Y39 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms