Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF550Q7Z398 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF550Q7Z398 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF550Q7Z398 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF550Q7Z398 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF550Q7Z398 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF550Q7Z398 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF550Q7Z398 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 TFAMP1-201ENST00000412727 736 ntBASIC14.87□□□□□ -0.03
ZNF550Q7Z398 AL355306.1-201ENST00000415580 579 ntBASIC14.87□□□□□ -0.03
ZNF550Q7Z398 RN7SL589P-201ENST00000481268 310 ntBASIC14.87□□□□□ -0.03
ZNF550Q7Z398 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZNF550Q7Z398 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 ACTG1P14-201ENST00000446382 1122 ntBASIC14.86□□□□□ -0.03
ZNF550Q7Z398 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 AC027612.4-201ENST00000605371 583 ntBASIC14.86□□□□□ -0.03
ZNF550Q7Z398 SPTSSB-204ENST00000617024 1292 ntBASIC14.86□□□□□ -0.03
ZNF550Q7Z398 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 AC008267.7-201ENST00000624570 1194 ntBASIC14.86□□□□□ -0.03
ZNF550Q7Z398 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 AP001282.1-201ENST00000531301 1499 ntBASIC14.86□□□□□ -0.03
ZNF550Q7Z398 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZNF550Q7Z398 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms