Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 AC069224.1-201ENST00000566372 1715 ntBASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.52□□□□□ -0.08
NHLRC1Q6VVB1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AC105233.2-201ENST00000523697 349 ntBASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AF228730.5-201ENST00000530288 346 ntBASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AC005829.1-201ENST00000570002 483 ntBASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 AC105339.1-204ENST00000636249 355 ntBASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 CDC14C-201ENST00000428251 1719 ntBASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.52□□□□□ -0.09
NHLRC1Q6VVB1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 RPSAP43-201ENST00000402237 625 ntBASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 AC061975.2-201ENST00000581722 295 ntBASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 MIR4321-201ENST00000592276 80 ntBASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 AL365330.1-201ENST00000607459 531 ntBASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 SPTSSB-204ENST00000617024 1292 ntBASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.51□□□□□ -0.09
NHLRC1Q6VVB1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms