Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 FO393414.2-201ENST00000405153 598 ntBASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 MIR6069-201ENST00000620069 79 ntBASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 AC106886.4-201ENST00000623557 2502 ntBASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 AC092850.2-201ENST00000623821 2697 ntBASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 AC114501.2-201ENST00000439631 535 ntBASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 SDHAP3-202ENST00000515467 728 ntBASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 AC135586.1-201ENST00000539323 574 ntBASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 AC004233.3-201ENST00000607794 1269 ntBASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 CYP4F24P-201ENST00000586049 1580 ntBASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 AL136982.4-201ENST00000437689 1740 ntBASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H3F3CQ6NXT2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 ME2P1-201ENST00000426028 1970 ntBASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms