Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC93Q567U6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC93Q567U6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 AZGP1P1-201ENST00000411909 902 ntBASIC19.64■□□□□ 0.73
CCDC93Q567U6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 EEF1DP4-201ENST00000446006 880 ntBASIC19.64■□□□□ 0.73
CCDC93Q567U6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 FTH1P14-201ENST00000482930 551 ntBASIC19.64■□□□□ 0.73
CCDC93Q567U6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC93Q567U6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC93Q567U6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC93Q567U6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC93Q567U6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC93Q567U6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.63■□□□□ 0.73
CCDC93Q567U6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 AC004987.2-201ENST00000395959 1148 ntBASIC19.63■□□□□ 0.73
CCDC93Q567U6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 RPL13AP25-201ENST00000484130 612 ntBASIC19.63■□□□□ 0.73
CCDC93Q567U6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 AC079316.1-201ENST00000548397 411 ntBASIC19.63■□□□□ 0.73
CCDC93Q567U6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
CCDC93Q567U6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC93Q567U6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 AC074338.1-201ENST00000416825 156 ntBASIC19.62■□□□□ 0.73
CCDC93Q567U6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 AC009486.1-201ENST00000569860 813 ntBASIC19.62■□□□□ 0.73
CCDC93Q567U6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC93Q567U6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CCDC93Q567U6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms