Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 SPCS2P4-201ENST00000436160 681 ntBASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 SPDYE11-202ENST00000450699 704 ntBASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AC093520.2-201ENST00000561830 333 ntBASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 SPDYE9P-201ENST00000570642 692 ntBASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 SPDYE10P-202ENST00000612005 668 ntBASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 SPDYE8P-202ENST00000612377 668 ntBASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 FAM86C2P-203ENST00000528684 1004 ntBASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 LINC01225-203ENST00000563550 1244 ntBASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 AP001160.2-201ENST00000596071 487 ntBASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 AC027612.4-201ENST00000605371 583 ntBASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.35■□□□□ 0.21
KHDC1Q4VXA5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms