Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
UBE3AQ05086 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBE3AQ05086 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.97■□□□□ 0.31
UBE3AQ05086 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE3AQ05086 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBE3AQ05086 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE3AQ05086 AC099336.1-201ENST00000417053 1171 ntBASIC16.97■□□□□ 0.31
UBE3AQ05086 SOCS2P1-201ENST00000417727 557 ntBASIC16.97■□□□□ 0.31
UBE3AQ05086 AC134915.1-201ENST00000426461 574 ntBASIC16.97■□□□□ 0.31
UBE3AQ05086 RPL7P3-201ENST00000441388 714 ntBASIC16.97■□□□□ 0.31
UBE3AQ05086 CSF2RBP1-201ENST00000447905 391 ntBASIC16.97■□□□□ 0.31
UBE3AQ05086 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UBE3AQ05086 AC068587.3-201ENST00000526613 355 ntBASIC16.97■□□□□ 0.31
UBE3AQ05086 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.97■□□□□ 0.31
UBE3AQ05086 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.97■□□□□ 0.31
UBE3AQ05086 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE3AQ05086 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.97■□□□□ 0.31
UBE3AQ05086 KRT8P44-201ENST00000441609 1350 ntBASIC16.97■□□□□ 0.31
UBE3AQ05086 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.97■□□□□ 0.31
UBE3AQ05086 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE3AQ05086 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.97■□□□□ 0.31
UBE3AQ05086 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.97■□□□□ 0.31
UBE3AQ05086 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE3AQ05086 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
UBE3AQ05086 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UBE3AQ05086 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
UBE3AQ05086 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
UBE3AQ05086 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE3AQ05086 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
UBE3AQ05086 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
UBE3AQ05086 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.96■□□□□ 0.31
UBE3AQ05086 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE3AQ05086 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
UBE3AQ05086 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UBE3AQ05086 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.96■□□□□ 0.31
UBE3AQ05086 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.96■□□□□ 0.31
UBE3AQ05086 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.96■□□□□ 0.31
UBE3AQ05086 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE3AQ05086 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.96■□□□□ 0.31
UBE3AQ05086 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.96■□□□□ 0.31
UBE3AQ05086 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.96■□□□□ 0.31
UBE3AQ05086 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE3AQ05086 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.96■□□□□ 0.31
UBE3AQ05086 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.96■□□□□ 0.31
UBE3AQ05086 AP000812.2-201ENST00000538934 718 ntBASIC16.96■□□□□ 0.31
UBE3AQ05086 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.96■□□□□ 0.31
UBE3AQ05086 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE3AQ05086 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE3AQ05086 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.96■□□□□ 0.31
UBE3AQ05086 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
UBE3AQ05086 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBE3AQ05086 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UBE3AQ05086 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.96■□□□□ 0.3
UBE3AQ05086 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
UBE3AQ05086 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UBE3AQ05086 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.95■□□□□ 0.3
UBE3AQ05086 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UBE3AQ05086 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UBE3AQ05086 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE3AQ05086 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE3AQ05086 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 BRWD1P1-201ENST00000401091 371 ntBASIC16.95■□□□□ 0.3
UBE3AQ05086 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE3AQ05086 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.95■□□□□ 0.3
UBE3AQ05086 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.95■□□□□ 0.3
UBE3AQ05086 TARDBPP1-201ENST00000442013 1203 ntBASIC16.95■□□□□ 0.3
UBE3AQ05086 AL355864.2-201ENST00000447420 863 ntBASIC16.95■□□□□ 0.3
UBE3AQ05086 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE3AQ05086 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.95■□□□□ 0.3
UBE3AQ05086 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE3AQ05086 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.95■□□□□ 0.3
UBE3AQ05086 AC009486.1-201ENST00000569860 813 ntBASIC16.95■□□□□ 0.3
UBE3AQ05086 AC124283.3-201ENST00000570869 594 ntBASIC16.95■□□□□ 0.3
UBE3AQ05086 AC084346.2-201ENST00000607097 949 ntBASIC16.95■□□□□ 0.3
UBE3AQ05086 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.95■□□□□ 0.3
UBE3AQ05086 INTS4P2-202ENST00000614726 2019 ntBASIC16.95■□□□□ 0.3
UBE3AQ05086 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE3AQ05086 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE3AQ05086 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
UBE3AQ05086 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms