Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H1AQ02539 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 AC004870.1-201ENST00000315132 882 ntBASIC12.42□□□□□ -0.42
HIST1H1AQ02539 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 DUSP5P1-201ENST00000441325 1139 ntBASIC12.42□□□□□ -0.42
HIST1H1AQ02539 POU5F1P6-201ENST00000466990 990 ntBASIC12.42□□□□□ -0.42
HIST1H1AQ02539 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 IGHV3-65-201ENST00000523210 341 ntBASIC12.42□□□□□ -0.42
HIST1H1AQ02539 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 AL603832.2-201ENST00000566195 2125 ntBASIC12.42□□□□□ -0.42
HIST1H1AQ02539 MIR4751-201ENST00000578027 74 ntBASIC12.42□□□□□ -0.42
HIST1H1AQ02539 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HIST1H1AQ02539 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 HNRNPDP1-201ENST00000439535 754 ntBASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AC018712.1-201ENST00000455767 687 ntBASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AC108073.2-201ENST00000464002 357 ntBASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AC092910.1-201ENST00000482027 1129 ntBASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AC004790.2-201ENST00000623588 572 ntBASIC12.41□□□□□ -0.42
HIST1H1AQ02539 AC022532.1-201ENST00000624563 1728 ntBASIC12.41□□□□□ -0.42
HIST1H1AQ02539 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1AQ02539 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms