Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HLA-J-203ENST00000494367 1087 ntBASIC15.71■□□□□ 0.11
YBX1P67809 AC098859.1-201ENST00000502915 1238 ntBASIC15.71■□□□□ 0.11
YBX1P67809 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.71■□□□□ 0.11
YBX1P67809 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.71■□□□□ 0.11
YBX1P67809 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.71■□□□□ 0.11
YBX1P67809 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.71■□□□□ 0.11
YBX1P67809 AC093028.1-201ENST00000622998 982 ntBASIC15.71■□□□□ 0.11
YBX1P67809 LINC00628-201ENST00000628516 1289 ntBASIC15.71■□□□□ 0.11
YBX1P67809 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
YBX1P67809 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
YBX1P67809 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.71■□□□□ 0.1
YBX1P67809 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
YBX1P67809 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
YBX1P67809 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
YBX1P67809 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 KRT18P28-201ENST00000453838 1332 ntBASIC15.7■□□□□ 0.1
YBX1P67809 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
YBX1P67809 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 LINC02228-204ENST00000642115 2962 ntBASIC15.7■□□□□ 0.1
YBX1P67809 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.7■□□□□ 0.1
YBX1P67809 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
YBX1P67809 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
YBX1P67809 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.7■□□□□ 0.1
YBX1P67809 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.7■□□□□ 0.1
YBX1P67809 METTL21AP1-201ENST00000438852 635 ntBASIC15.7■□□□□ 0.1
YBX1P67809 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.7■□□□□ 0.1
YBX1P67809 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.7■□□□□ 0.1
YBX1P67809 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.7■□□□□ 0.1
YBX1P67809 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.7■□□□□ 0.1
YBX1P67809 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.7■□□□□ 0.1
YBX1P67809 AC069224.1-201ENST00000566372 1715 ntBASIC15.7■□□□□ 0.1
YBX1P67809 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
YBX1P67809 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.7■□□□□ 0.1
YBX1P67809 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.7■□□□□ 0.1
YBX1P67809 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.69■□□□□ 0.1
YBX1P67809 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 AL136379.1-201ENST00000623471 2642 ntBASIC15.69■□□□□ 0.1
YBX1P67809 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.69■□□□□ 0.1
YBX1P67809 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
YBX1P67809 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.69■□□□□ 0.1
YBX1P67809 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
YBX1P67809 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
YBX1P67809 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
YBX1P67809 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.69■□□□□ 0.1
YBX1P67809 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.69■□□□□ 0.1
YBX1P67809 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.69■□□□□ 0.1
YBX1P67809 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.69■□□□□ 0.1
YBX1P67809 RARRES2P9-201ENST00000565168 469 ntBASIC15.69■□□□□ 0.1
YBX1P67809 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
YBX1P67809 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.69■□□□□ 0.1
YBX1P67809 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.69■□□□□ 0.1
YBX1P67809 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.69■□□□□ 0.1
YBX1P67809 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.69■□□□□ 0.1
YBX1P67809 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.69■□□□□ 0.1
YBX1P67809 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.69■□□□□ 0.1
YBX1P67809 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YBX1P67809 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms