Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBA52P62987 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14□□□□□ -0.17
UBA52P62987 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBA52P62987 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBA52P62987 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBA52P62987 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBA52P62987 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBA52P62987 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
UBA52P62987 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBA52P62987 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14□□□□□ -0.17
UBA52P62987 MKNK2P1-201ENST00000437526 628 ntBASIC14□□□□□ -0.17
UBA52P62987 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14□□□□□ -0.17
UBA52P62987 SIGLEC30P-201ENST00000455569 941 ntBASIC14□□□□□ -0.17
UBA52P62987 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14□□□□□ -0.17
UBA52P62987 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14□□□□□ -0.17
UBA52P62987 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14□□□□□ -0.17
UBA52P62987 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14□□□□□ -0.17
UBA52P62987 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBA52P62987 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
UBA52P62987 AL078644.1-201ENST00000609881 752 ntBASIC14□□□□□ -0.17
UBA52P62987 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14□□□□□ -0.17
UBA52P62987 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBA52P62987 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14□□□□□ -0.17
UBA52P62987 GRK6P1-201ENST00000400595 1711 ntBASIC14□□□□□ -0.17
UBA52P62987 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBA52P62987 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
UBA52P62987 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBA52P62987 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14□□□□□ -0.17
UBA52P62987 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBA52P62987 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBA52P62987 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBA52P62987 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBA52P62987 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.99□□□□□ -0.17
UBA52P62987 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UBA52P62987 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
UBA52P62987 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
UBA52P62987 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
UBA52P62987 AC003669.1-201ENST00000334569 611 ntBASIC13.99□□□□□ -0.17
UBA52P62987 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.99□□□□□ -0.17
UBA52P62987 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.99□□□□□ -0.17
UBA52P62987 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
UBA52P62987 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
UBA52P62987 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.99□□□□□ -0.17
UBA52P62987 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.99□□□□□ -0.17
UBA52P62987 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 AL513190.1-201ENST00000621254 727 ntBASIC13.99□□□□□ -0.17
UBA52P62987 AC004790.2-201ENST00000623588 572 ntBASIC13.99□□□□□ -0.17
UBA52P62987 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 AP005117.1-202ENST00000581724 1908 ntBASIC13.99□□□□□ -0.17
UBA52P62987 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UBA52P62987 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBA52P62987 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
UBA52P62987 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
UBA52P62987 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBA52P62987 AC132938.5-201ENST00000624980 1813 ntBASIC13.99□□□□□ -0.17
UBA52P62987 GPR89P-201ENST00000407924 1495 ntBASIC13.99□□□□□ -0.17
UBA52P62987 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBA52P62987 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.98□□□□□ -0.17
UBA52P62987 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms