Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPS4XP62701 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
RPS4XP62701 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.55□□□□□ -0.08
RPS4XP62701 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPS4XP62701 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.55□□□□□ -0.08
RPS4XP62701 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPS4XP62701 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.54□□□□□ -0.08
RPS4XP62701 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.54□□□□□ -0.08
RPS4XP62701 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RPS4XP62701 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RPS4XP62701 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.54□□□□□ -0.08
RPS4XP62701 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 AL139400.1-201ENST00000366220 510 ntBASIC14.54□□□□□ -0.08
RPS4XP62701 AL355306.1-201ENST00000415580 579 ntBASIC14.54□□□□□ -0.08
RPS4XP62701 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.54□□□□□ -0.08
RPS4XP62701 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.54□□□□□ -0.08
RPS4XP62701 TIMM8BP1-201ENST00000452384 211 ntBASIC14.54□□□□□ -0.08
RPS4XP62701 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.54□□□□□ -0.08
RPS4XP62701 AC098859.1-201ENST00000502915 1238 ntBASIC14.54□□□□□ -0.08
RPS4XP62701 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.54□□□□□ -0.08
RPS4XP62701 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.54□□□□□ -0.08
RPS4XP62701 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.54□□□□□ -0.08
RPS4XP62701 AL138918.1-201ENST00000568306 659 ntBASIC14.54□□□□□ -0.08
RPS4XP62701 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 AC061975.2-201ENST00000581722 295 ntBASIC14.54□□□□□ -0.08
RPS4XP62701 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.54□□□□□ -0.08
RPS4XP62701 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.54□□□□□ -0.08
RPS4XP62701 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
RPS4XP62701 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.54□□□□□ -0.08
RPS4XP62701 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.54□□□□□ -0.08
RPS4XP62701 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.54□□□□□ -0.08
RPS4XP62701 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RPS4XP62701 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RPS4XP62701 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RPS4XP62701 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RPS4XP62701 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPS4XP62701 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RPS4XP62701 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.53□□□□□ -0.08
RPS4XP62701 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
RPS4XP62701 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 AC134407.2-201ENST00000625089 1978 ntBASIC14.53□□□□□ -0.08
RPS4XP62701 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.53□□□□□ -0.08
RPS4XP62701 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RPS4XP62701 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.53□□□□□ -0.08
RPS4XP62701 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RPS4XP62701 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RPS4XP62701 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RPS4XP62701 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.53□□□□□ -0.08
RPS4XP62701 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
RPS4XP62701 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.53□□□□□ -0.08
RPS4XP62701 ADH5P3-201ENST00000433842 1137 ntBASIC14.53□□□□□ -0.08
RPS4XP62701 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.53□□□□□ -0.08
RPS4XP62701 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.53□□□□□ -0.08
RPS4XP62701 AC026120.1-201ENST00000611536 926 ntBASIC14.53□□□□□ -0.08
RPS4XP62701 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
RPS4XP62701 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPS4XP62701 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms