Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ZC3H6P61129 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC21.26■□□□□ 0.99
ZC3H6P61129 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H6P61129 PRKN-211ENST00000615065 261 ntTSL 5 BASIC21.26■□□□□ 0.99
ZC3H6P61129 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.26■□□□□ 0.99
ZC3H6P61129 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.26■□□□□ 0.99
ZC3H6P61129 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ZC3H6P61129 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ZC3H6P61129 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ZC3H6P61129 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.26■□□□□ 0.99
ZC3H6P61129 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H6P61129 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H6P61129 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H6P61129 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.26■□□□□ 0.99
ZC3H6P61129 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H6P61129 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H6P61129 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ZC3H6P61129 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
ZC3H6P61129 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
ZC3H6P61129 AC134407.2-201ENST00000625089 1978 ntBASIC21.25■□□□□ 0.99
ZC3H6P61129 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ZC3H6P61129 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ZC3H6P61129 SLC25A24P2-201ENST00000415059 510 ntBASIC21.25■□□□□ 0.99
ZC3H6P61129 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.25■□□□□ 0.99
ZC3H6P61129 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.25■□□□□ 0.99
ZC3H6P61129 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.25■□□□□ 0.99
ZC3H6P61129 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.25■□□□□ 0.99
ZC3H6P61129 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.25■□□□□ 0.99
ZC3H6P61129 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 PFN2-215ENST00000497148 743 ntTSL 4 BASIC21.25■□□□□ 0.99
ZC3H6P61129 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H6P61129 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H6P61129 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H6P61129 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC21.25■□□□□ 0.99
ZC3H6P61129 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.25■□□□□ 0.99
ZC3H6P61129 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H6P61129 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
ZC3H6P61129 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H6P61129 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.24■□□□□ 0.99
ZC3H6P61129 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.24■□□□□ 0.99
ZC3H6P61129 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.24■□□□□ 0.99
ZC3H6P61129 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.24■□□□□ 0.99
ZC3H6P61129 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.24■□□□□ 0.99
ZC3H6P61129 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
ZC3H6P61129 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.24■□□□□ 0.99
ZC3H6P61129 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.24■□□□□ 0.99
ZC3H6P61129 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.24■□□□□ 0.99
ZC3H6P61129 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.24■□□□□ 0.99
ZC3H6P61129 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.24■□□□□ 0.99
ZC3H6P61129 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H6P61129 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ZC3H6P61129 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.23■□□□□ 0.99
ZC3H6P61129 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
ZC3H6P61129 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 CALR4P-201ENST00000431943 946 ntBASIC21.23■□□□□ 0.99
ZC3H6P61129 FAM197Y7-201ENST00000432892 766 ntBASIC21.23■□□□□ 0.99
ZC3H6P61129 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.23■□□□□ 0.99
ZC3H6P61129 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.23■□□□□ 0.99
ZC3H6P61129 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 AC023310.1-201ENST00000554836 735 ntBASIC21.23■□□□□ 0.99
ZC3H6P61129 HNRNPUP1-201ENST00000554987 333 ntBASIC21.23■□□□□ 0.99
ZC3H6P61129 HNRNPA1P48-202ENST00000565308 961 ntBASIC21.23■□□□□ 0.99
ZC3H6P61129 AC025279.2-201ENST00000569730 653 ntBASIC21.23■□□□□ 0.99
ZC3H6P61129 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ZC3H6P61129 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC21.23■□□□□ 0.99
ZC3H6P61129 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms