Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PMS1P54277 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PMS1P54277 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.72■□□□□ 0.43
PMS1P54277 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PMS1P54277 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.72■□□□□ 0.43
PMS1P54277 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.72■□□□□ 0.43
PMS1P54277 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.72■□□□□ 0.43
PMS1P54277 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PMS1P54277 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.72■□□□□ 0.43
PMS1P54277 AC004832.2-201ENST00000426397 482 ntBASIC17.72■□□□□ 0.43
PMS1P54277 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.72■□□□□ 0.43
PMS1P54277 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.72■□□□□ 0.43
PMS1P54277 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.72■□□□□ 0.43
PMS1P54277 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.72■□□□□ 0.43
PMS1P54277 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.72■□□□□ 0.43
PMS1P54277 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.72■□□□□ 0.43
PMS1P54277 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.72■□□□□ 0.43
PMS1P54277 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
PMS1P54277 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 AC026120.1-201ENST00000611536 926 ntBASIC17.72■□□□□ 0.43
PMS1P54277 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PMS1P54277 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PMS1P54277 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PMS1P54277 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PMS1P54277 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PMS1P54277 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PMS1P54277 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PMS1P54277 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PMS1P54277 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
PMS1P54277 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PMS1P54277 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.71■□□□□ 0.43
PMS1P54277 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PMS1P54277 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PMS1P54277 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PMS1P54277 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PMS1P54277 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.71■□□□□ 0.43
PMS1P54277 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.71■□□□□ 0.43
PMS1P54277 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
PMS1P54277 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PMS1P54277 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PMS1P54277 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.71■□□□□ 0.43
PMS1P54277 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PMS1P54277 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.71■□□□□ 0.42
PMS1P54277 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.7■□□□□ 0.42
PMS1P54277 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.7■□□□□ 0.42
PMS1P54277 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.7■□□□□ 0.42
PMS1P54277 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.7■□□□□ 0.42
PMS1P54277 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.7■□□□□ 0.42
PMS1P54277 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.7■□□□□ 0.42
PMS1P54277 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PMS1P54277 AC069335.1-201ENST00000489972 472 ntBASIC17.7■□□□□ 0.42
PMS1P54277 FAM86C2P-203ENST00000528684 1004 ntBASIC17.7■□□□□ 0.42
PMS1P54277 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.7■□□□□ 0.42
PMS1P54277 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.7■□□□□ 0.42
PMS1P54277 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.7■□□□□ 0.42
PMS1P54277 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.7■□□□□ 0.42
PMS1P54277 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 C20orf181-201ENST00000623918 480 ntBASIC17.7■□□□□ 0.42
PMS1P54277 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PMS1P54277 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.7■□□□□ 0.42
PMS1P54277 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms