Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.71■□□□□ 0.43
CDK7P50613 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK7P50613 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK7P50613 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDK7P50613 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDK7P50613 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.7■□□□□ 0.42
CDK7P50613 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CDK7P50613 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.7■□□□□ 0.42
CDK7P50613 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK7P50613 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK7P50613 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 AC004987.2-201ENST00000395959 1148 ntBASIC17.7■□□□□ 0.42
CDK7P50613 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 BCYRN1-201ENST00000418539 200 ntBASIC17.7■□□□□ 0.42
CDK7P50613 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDK7P50613 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.7■□□□□ 0.42
CDK7P50613 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.7■□□□□ 0.42
CDK7P50613 BCRP2-202ENST00000447763 634 ntBASIC17.7■□□□□ 0.42
CDK7P50613 FAM86LP-201ENST00000478302 853 ntBASIC17.7■□□□□ 0.42
CDK7P50613 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.7■□□□□ 0.42
CDK7P50613 BCRP6-201ENST00000510112 632 ntBASIC17.7■□□□□ 0.42
CDK7P50613 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.7■□□□□ 0.42
CDK7P50613 BCRP7-201ENST00000511549 544 ntBASIC17.7■□□□□ 0.42
CDK7P50613 AP001889.1-201ENST00000525414 633 ntBASIC17.7■□□□□ 0.42
CDK7P50613 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.7■□□□□ 0.42
CDK7P50613 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.7■□□□□ 0.42
CDK7P50613 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK7P50613 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CDK7P50613 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.7■□□□□ 0.42
CDK7P50613 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDK7P50613 AL691432.1-201ENST00000596308 1422 ntBASIC17.7■□□□□ 0.42
CDK7P50613 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDK7P50613 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CDK7P50613 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK7P50613 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.69■□□□□ 0.42
CDK7P50613 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 LINC01144-201ENST00000626198 1710 ntBASIC17.69■□□□□ 0.42
CDK7P50613 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CDK7P50613 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK7P50613 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 AC022211.2-201ENST00000585075 2527 ntBASIC17.69■□□□□ 0.42
CDK7P50613 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 PKD1P1-201ENST00000458669 6805 ntBASIC17.69■□□□□ 0.42
CDK7P50613 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK7P50613 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 NKILA-202ENST00000614771 2598 ntBASIC17.69■□□□□ 0.42
CDK7P50613 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.69■□□□□ 0.42
CDK7P50613 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CDK7P50613 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.69■□□□□ 0.42
CDK7P50613 BRWD1P1-201ENST00000401091 371 ntBASIC17.69■□□□□ 0.42
CDK7P50613 AZGP1P1-201ENST00000411909 902 ntBASIC17.69■□□□□ 0.42
CDK7P50613 AC074338.1-201ENST00000416825 156 ntBASIC17.69■□□□□ 0.42
CDK7P50613 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.69■□□□□ 0.42
CDK7P50613 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK7P50613 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.69■□□□□ 0.42
CDK7P50613 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.69■□□□□ 0.42
CDK7P50613 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.69■□□□□ 0.42
CDK7P50613 AC108725.1-201ENST00000495472 409 ntBASIC17.69■□□□□ 0.42
CDK7P50613 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK7P50613 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK7P50613 AC103810.3-201ENST00000583567 96 ntBASIC17.69■□□□□ 0.42
CDK7P50613 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.69■□□□□ 0.42
CDK7P50613 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.69■□□□□ 0.42
CDK7P50613 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK7P50613 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK7P50613 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDK7P50613 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK7P50613 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms