Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASP4P49662 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASP4P49662 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASP4P49662 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CASP4P49662 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CASP4P49662 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
CASP4P49662 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CASP4P49662 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CASP4P49662 CYP4F24P-201ENST00000586049 1580 ntBASIC17.54■□□□□ 0.4
CASP4P49662 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.54■□□□□ 0.4
CASP4P49662 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.54■□□□□ 0.4
CASP4P49662 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.54■□□□□ 0.4
CASP4P49662 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.54■□□□□ 0.4
CASP4P49662 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 AC243562.2-201ENST00000561247 970 ntBASIC17.54■□□□□ 0.4
CASP4P49662 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 AC018529.1-201ENST00000613063 361 ntBASIC17.54■□□□□ 0.4
CASP4P49662 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.54■□□□□ 0.4
CASP4P49662 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.54■□□□□ 0.4
CASP4P49662 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.54■□□□□ 0.4
CASP4P49662 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASP4P49662 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CASP4P49662 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.53■□□□□ 0.4
CASP4P49662 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 HYMAI-201ENST00000635591 3347 ntBASIC17.53■□□□□ 0.4
CASP4P49662 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 TSEN15P1-201ENST00000423257 515 ntBASIC17.53■□□□□ 0.4
CASP4P49662 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.53■□□□□ 0.4
CASP4P49662 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.53■□□□□ 0.4
CASP4P49662 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 AC079781.4-201ENST00000641908 219 ntBASIC17.53■□□□□ 0.4
CASP4P49662 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CASP4P49662 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CASP4P49662 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CASP4P49662 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.52■□□□□ 0.4
CASP4P49662 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CASP4P49662 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.52■□□□□ 0.4
CASP4P49662 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.52■□□□□ 0.4
CASP4P49662 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CASP4P49662 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASP4P49662 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.52■□□□□ 0.4
CASP4P49662 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.52■□□□□ 0.4
CASP4P49662 AL139010.1-201ENST00000454878 894 ntBASIC17.52■□□□□ 0.4
CASP4P49662 HLA-J-203ENST00000494367 1087 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms