Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.42■□□□□ 0.06
PRIM2P49643 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.42■□□□□ 0.06
PRIM2P49643 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.42■□□□□ 0.06
PRIM2P49643 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PRIM2P49643 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 BCAR1-209ENST00000546196 1340 ntBASIC15.42■□□□□ 0.06
PRIM2P49643 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRIM2P49643 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.42■□□□□ 0.06
PRIM2P49643 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
PRIM2P49643 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.41■□□□□ 0.06
PRIM2P49643 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.41■□□□□ 0.06
PRIM2P49643 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.41■□□□□ 0.06
PRIM2P49643 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 AC097376.2-205ENST00000610159 5334 ntBASIC15.41■□□□□ 0.06
PRIM2P49643 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PRIM2P49643 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PRIM2P49643 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.41■□□□□ 0.06
PRIM2P49643 SLC25A1P1-201ENST00000528351 927 ntBASIC15.41■□□□□ 0.06
PRIM2P49643 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PRIM2P49643 AC109635.5-201ENST00000533593 962 ntBASIC15.41■□□□□ 0.06
PRIM2P49643 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.41■□□□□ 0.06
PRIM2P49643 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.41■□□□□ 0.06
PRIM2P49643 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.41■□□□□ 0.06
PRIM2P49643 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.41■□□□□ 0.06
PRIM2P49643 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.41■□□□□ 0.06
PRIM2P49643 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.41■□□□□ 0.06
PRIM2P49643 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.41■□□□□ 0.06
PRIM2P49643 BX640515.1-201ENST00000617215 977 ntBASIC15.41■□□□□ 0.06
PRIM2P49643 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PRIM2P49643 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 U82695.1-201ENST00000635752 1889 ntBASIC15.41■□□□□ 0.06
PRIM2P49643 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 AL592424.1-201ENST00000563624 1536 ntBASIC15.41■□□□□ 0.06
PRIM2P49643 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRIM2P49643 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
PRIM2P49643 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PRIM2P49643 AP005117.1-202ENST00000581724 1908 ntBASIC15.41■□□□□ 0.06
PRIM2P49643 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PRIM2P49643 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PRIM2P49643 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRIM2P49643 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
PRIM2P49643 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRIM2P49643 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.4■□□□□ 0.06
PRIM2P49643 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.4■□□□□ 0.06
PRIM2P49643 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.4■□□□□ 0.06
PRIM2P49643 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.4■□□□□ 0.06
PRIM2P49643 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.4■□□□□ 0.06
PRIM2P49643 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.4■□□□□ 0.06
PRIM2P49643 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.4■□□□□ 0.06
PRIM2P49643 AL009183.1-201ENST00000603760 355 ntBASIC15.4■□□□□ 0.06
PRIM2P49643 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.4■□□□□ 0.06
PRIM2P49643 AC004877.2-201ENST00000623941 599 ntBASIC15.4■□□□□ 0.06
PRIM2P49643 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.4■□□□□ 0.06
PRIM2P49643 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms