Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 HLA-H-201ENST00000383620 1096 ntBASIC14.38□□□□□ -0.11
CSNK1A1P48729 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 SLC25A39P2-201ENST00000537614 270 ntBASIC14.38□□□□□ -0.11
CSNK1A1P48729 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 AC055717.3-201ENST00000622967 595 ntBASIC14.38□□□□□ -0.11
CSNK1A1P48729 AL513210.1-201ENST00000629608 234 ntBASIC14.38□□□□□ -0.11
CSNK1A1P48729 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 LINC02447-202ENST00000501888 2146 ntBASIC14.38□□□□□ -0.11
CSNK1A1P48729 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 AC126755.1-201ENST00000525846 6405 ntBASIC14.37□□□□□ -0.11
CSNK1A1P48729 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 FAM220BP-201ENST00000377689 816 ntBASIC14.37□□□□□ -0.11
CSNK1A1P48729 KRT18P13-201ENST00000400056 1290 ntBASIC14.37□□□□□ -0.11
CSNK1A1P48729 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 KRT18P32-201ENST00000424695 1287 ntBASIC14.37□□□□□ -0.11
CSNK1A1P48729 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 AP000344.2-201ENST00000512987 629 ntBASIC14.37□□□□□ -0.11
CSNK1A1P48729 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 CDC14C-201ENST00000428251 1719 ntBASIC14.37□□□□□ -0.11
CSNK1A1P48729 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1A1P48729 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1A1P48729 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 AC022188.1-201ENST00000620960 1664 ntBASIC14.36□□□□□ -0.11
CSNK1A1P48729 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 AC069224.1-201ENST00000566372 1715 ntBASIC14.36□□□□□ -0.11
CSNK1A1P48729 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 AC004461.1-201ENST00000412461 403 ntBASIC14.36□□□□□ -0.11
CSNK1A1P48729 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1A1P48729 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 AC061975.2-201ENST00000581722 295 ntBASIC14.36□□□□□ -0.11
CSNK1A1P48729 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.36□□□□□ -0.11
CSNK1A1P48729 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms