Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
KRT6CP48668 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT6CP48668 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT6CP48668 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
KRT6CP48668 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
KRT6CP48668 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 AC002056.1-201ENST00000395613 760 ntBASIC15.69■□□□□ 0.1
KRT6CP48668 AC007967.2-201ENST00000432613 625 ntBASIC15.69■□□□□ 0.1
KRT6CP48668 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT6CP48668 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRT6CP48668 PRYP6-201ENST00000514804 343 ntBASIC15.69■□□□□ 0.1
KRT6CP48668 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
KRT6CP48668 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.69■□□□□ 0.1
KRT6CP48668 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
KRT6CP48668 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT6CP48668 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRT6CP48668 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT6CP48668 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT6CP48668 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.68■□□□□ 0.1
KRT6CP48668 AL589702.1-201ENST00000641229 1509 ntBASIC15.68■□□□□ 0.1
KRT6CP48668 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.68■□□□□ 0.1
KRT6CP48668 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 ZNF259P1-201ENST00000407656 1365 ntBASIC15.68■□□□□ 0.1
KRT6CP48668 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.68■□□□□ 0.1
KRT6CP48668 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 AC074386.1-202ENST00000463561 864 ntBASIC15.68■□□□□ 0.1
KRT6CP48668 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.68■□□□□ 0.1
KRT6CP48668 AC002347.1-201ENST00000569543 541 ntBASIC15.68■□□□□ 0.1
KRT6CP48668 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.68■□□□□ 0.1
KRT6CP48668 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.68■□□□□ 0.1
KRT6CP48668 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.68■□□□□ 0.1
KRT6CP48668 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.68■□□□□ 0.1
KRT6CP48668 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KRT6CP48668 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6CP48668 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6CP48668 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
KRT6CP48668 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
KRT6CP48668 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.67■□□□□ 0.1
KRT6CP48668 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6CP48668 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KRT6CP48668 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.67■□□□□ 0.1
KRT6CP48668 KRT18P2-201ENST00000447938 1258 ntBASIC15.67■□□□□ 0.1
KRT6CP48668 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.67■□□□□ 0.1
KRT6CP48668 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6CP48668 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6CP48668 AC112191.1-201ENST00000523689 701 ntBASIC15.67■□□□□ 0.1
KRT6CP48668 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.67■□□□□ 0.1
KRT6CP48668 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6CP48668 PDPK2P-202ENST00000562415 1191 ntBASIC15.67■□□□□ 0.1
KRT6CP48668 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6CP48668 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6CP48668 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
KRT6CP48668 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6CP48668 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6CP48668 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6CP48668 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms