Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A6P48664 TCAF2P1-201ENST00000291129 2421 ntBASIC15.89■□□□□ 0.13
SLC1A6P48664 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A6P48664 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC1A6P48664 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A6P48664 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A6P48664 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A6P48664 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC1A6P48664 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A6P48664 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC1A6P48664 AL009178.2-201ENST00000597278 2719 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC1A6P48664 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC1A6P48664 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 AC126755.1-201ENST00000525846 6405 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 AC092127.1-201ENST00000567093 3455 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC1A6P48664 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC1A6P48664 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
SLC1A6P48664 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC1A6P48664 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.88■□□□□ 0.13
SLC1A6P48664 RPS2P1-201ENST00000434010 821 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC1A6P48664 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC1A6P48664 FAM185BP-201ENST00000443595 716 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SLC1A6P48664 AP002469.2-201ENST00000531724 424 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 AC091304.2-201ENST00000564639 760 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 OR7E47P-204ENST00000575924 449 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC1A6P48664 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.88■□□□□ 0.13
SLC1A6P48664 AL365330.1-201ENST00000607459 531 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 MIR1199-201ENST00000621445 119 ntBASIC15.88■□□□□ 0.13
SLC1A6P48664 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
SLC1A6P48664 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC1A6P48664 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC1A6P48664 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC1A6P48664 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC1A6P48664 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A6P48664 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC1A6P48664 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC1A6P48664 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC1A6P48664 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC1A6P48664 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 TSPY19P-201ENST00000418461 509 ntBASIC15.87■□□□□ 0.13
SLC1A6P48664 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 TSPY18P-201ENST00000441642 509 ntBASIC15.87■□□□□ 0.13
SLC1A6P48664 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC1A6P48664 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC1A6P48664 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC1A6P48664 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC1A6P48664 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC1A6P48664 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC1A6P48664 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC1A6P48664 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC1A6P48664 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A6P48664 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A6P48664 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A6P48664 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A6P48664 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC1A6P48664 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms