Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP13P45452 AKAP8P1-201ENST00000434743 1349 ntBASIC16.78■□□□□ 0.28
MMP13P45452 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
MMP13P45452 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.78■□□□□ 0.28
MMP13P45452 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MMP13P45452 TFAMP1-201ENST00000412727 736 ntBASIC16.78■□□□□ 0.28
MMP13P45452 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP13P45452 GPX1P2-201ENST00000429271 606 ntBASIC16.78■□□□□ 0.28
MMP13P45452 ADH5P3-201ENST00000433842 1137 ntBASIC16.78■□□□□ 0.28
MMP13P45452 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 AL135744.1-201ENST00000565098 629 ntBASIC16.78■□□□□ 0.28
MMP13P45452 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.78■□□□□ 0.28
MMP13P45452 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP13P45452 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP13P45452 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP13P45452 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP13P45452 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
MMP13P45452 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP13P45452 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP13P45452 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MMP13P45452 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP13P45452 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
MMP13P45452 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MMP13P45452 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MMP13P45452 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
MMP13P45452 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP13P45452 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
MMP13P45452 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.77■□□□□ 0.28
MMP13P45452 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP13P45452 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP13P45452 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
MMP13P45452 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 ELL2P1-201ENST00000413990 1906 ntBASIC16.77■□□□□ 0.28
MMP13P45452 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 UPF3AP3-201ENST00000420996 769 ntBASIC16.77■□□□□ 0.28
MMP13P45452 RN7SL589P-201ENST00000481268 310 ntBASIC16.77■□□□□ 0.28
MMP13P45452 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP13P45452 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
MMP13P45452 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.77■□□□□ 0.28
MMP13P45452 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP13P45452 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP13P45452 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
MMP13P45452 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
MMP13P45452 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.77■□□□□ 0.28
MMP13P45452 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP13P45452 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP13P45452 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.77■□□□□ 0.27
MMP13P45452 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.77■□□□□ 0.27
MMP13P45452 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP13P45452 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.77■□□□□ 0.27
MMP13P45452 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
MMP13P45452 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP13P45452 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MMP13P45452 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MMP13P45452 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.77■□□□□ 0.27
MMP13P45452 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
MMP13P45452 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP13P45452 SSR4P1-203ENST00000599569 2260 ntBASIC16.76■□□□□ 0.27
MMP13P45452 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP13P45452 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MMP13P45452 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP13P45452 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms