Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC6A4P31645 CYP2T1P-202ENST00000641596 2535 ntBASIC16.47■□□□□ 0.23
SLC6A4P31645 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC6A4P31645 GNAQP1-201ENST00000444815 1067 ntBASIC16.47■□□□□ 0.23
SLC6A4P31645 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC6A4P31645 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC6A4P31645 SDHAP3-202ENST00000515467 728 ntBASIC16.47■□□□□ 0.23
SLC6A4P31645 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC6A4P31645 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SLC6A4P31645 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC6A4P31645 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 REXO1L1P-202ENST00000608646 1974 ntBASIC16.47■□□□□ 0.23
SLC6A4P31645 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SLC6A4P31645 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SLC6A4P31645 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A4P31645 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC6A4P31645 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC6A4P31645 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC6A4P31645 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLC6A4P31645 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC6A4P31645 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC6A4P31645 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A4P31645 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC6A4P31645 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A4P31645 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A4P31645 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.46■□□□□ 0.23
SLC6A4P31645 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC6A4P31645 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC6A4P31645 AL589987.1-201ENST00000453380 819 ntBASIC16.46■□□□□ 0.23
SLC6A4P31645 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC6A4P31645 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.46■□□□□ 0.23
SLC6A4P31645 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A4P31645 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC6A4P31645 AC018892.3-201ENST00000623986 2499 ntBASIC16.46■□□□□ 0.23
SLC6A4P31645 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A4P31645 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A4P31645 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SLC6A4P31645 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC6A4P31645 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC6A4P31645 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.46■□□□□ 0.22
SLC6A4P31645 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.46■□□□□ 0.22
SLC6A4P31645 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC6A4P31645 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
SLC6A4P31645 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A4P31645 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A4P31645 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 LINC02199-201ENST00000506655 2702 ntBASIC16.45■□□□□ 0.22
SLC6A4P31645 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLC6A4P31645 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SLC6A4P31645 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC6A4P31645 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC6A4P31645 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC6A4P31645 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC6A4P31645 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A4P31645 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A4P31645 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC6A4P31645 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC6A4P31645 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC6A4P31645 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms