Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
TM4SF1P30408 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.7■□□□□ 0.74
TM4SF1P30408 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.7■□□□□ 0.74
TM4SF1P30408 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.7■□□□□ 0.74
TM4SF1P30408 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.7■□□□□ 0.74
TM4SF1P30408 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.7■□□□□ 0.74
TM4SF1P30408 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.7■□□□□ 0.74
TM4SF1P30408 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 AC138951.2-201ENST00000623455 1161 ntBASIC19.7■□□□□ 0.74
TM4SF1P30408 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TM4SF1P30408 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
TM4SF1P30408 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.7■□□□□ 0.74
TM4SF1P30408 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.7■□□□□ 0.74
TM4SF1P30408 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 AC005052.1-201ENST00000625181 2492 ntBASIC19.69■□□□□ 0.74
TM4SF1P30408 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TM4SF1P30408 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.69■□□□□ 0.74
TM4SF1P30408 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.69■□□□□ 0.74
TM4SF1P30408 HOMER2P2-201ENST00000451621 847 ntBASIC19.69■□□□□ 0.74
TM4SF1P30408 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 AC079328.1-201ENST00000560358 952 ntBASIC19.69■□□□□ 0.74
TM4SF1P30408 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.69■□□□□ 0.74
TM4SF1P30408 AC016629.1-201ENST00000596579 586 ntBASIC19.69■□□□□ 0.74
TM4SF1P30408 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
TM4SF1P30408 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TM4SF1P30408 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
TM4SF1P30408 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF1P30408 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.68■□□□□ 0.74
TM4SF1P30408 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TM4SF1P30408 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.68■□□□□ 0.74
TM4SF1P30408 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.68■□□□□ 0.74
TM4SF1P30408 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.68■□□□□ 0.74
TM4SF1P30408 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TM4SF1P30408 MIR663B-201ENST00000408361 115 ntBASIC19.68■□□□□ 0.74
TM4SF1P30408 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 FNTAP2-201ENST00000430308 634 ntBASIC19.68■□□□□ 0.74
TM4SF1P30408 AC005077.2-201ENST00000449786 690 ntBASIC19.68■□□□□ 0.74
TM4SF1P30408 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.68■□□□□ 0.74
TM4SF1P30408 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.68■□□□□ 0.74
TM4SF1P30408 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.68■□□□□ 0.74
TM4SF1P30408 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.68■□□□□ 0.74
TM4SF1P30408 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TM4SF1P30408 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.68■□□□□ 0.74
TM4SF1P30408 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TM4SF1P30408 FZD10-202ENST00000539839 3282 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms