Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.93■□□□□ 0.14
VARSP26640 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.93■□□□□ 0.14
VARSP26640 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.93■□□□□ 0.14
VARSP26640 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.93■□□□□ 0.14
VARSP26640 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.93■□□□□ 0.14
VARSP26640 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 AC126177.1-201ENST00000547829 2218 ntBASIC15.92■□□□□ 0.14
VARSP26640 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
VARSP26640 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
VARSP26640 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
VARSP26640 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.92■□□□□ 0.14
VARSP26640 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.92■□□□□ 0.14
VARSP26640 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 AC092474.2-201ENST00000424288 719 ntBASIC15.92■□□□□ 0.14
VARSP26640 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.92■□□□□ 0.14
VARSP26640 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
VARSP26640 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.92■□□□□ 0.14
VARSP26640 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
VARSP26640 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
VARSP26640 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.92■□□□□ 0.14
VARSP26640 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VARSP26640 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.92■□□□□ 0.14
VARSP26640 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.91■□□□□ 0.14
VARSP26640 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
VARSP26640 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.91■□□□□ 0.14
VARSP26640 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
VARSP26640 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
VARSP26640 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.91■□□□□ 0.14
VARSP26640 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
VARSP26640 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.91■□□□□ 0.14
VARSP26640 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 ALG1L5P-201ENST00000482043 771 ntBASIC15.91■□□□□ 0.14
VARSP26640 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.91■□□□□ 0.14
VARSP26640 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.91■□□□□ 0.14
VARSP26640 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.91■□□□□ 0.14
VARSP26640 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC15.91■□□□□ 0.14
VARSP26640 AC016027.1-202ENST00000607927 1699 ntBASIC15.91■□□□□ 0.14
VARSP26640 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
VARSP26640 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
VARSP26640 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.91■□□□□ 0.14
VARSP26640 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
VARSP26640 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.91■□□□□ 0.14
VARSP26640 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.91■□□□□ 0.14
VARSP26640 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARSP26640 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
VARSP26640 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.9■□□□□ 0.14
VARSP26640 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.9■□□□□ 0.14
VARSP26640 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
VARSP26640 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VARSP26640 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
VARSP26640 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms