Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.85□□□□□ -0.19
CCL1P22362 EEF1DP4-201ENST00000446006 880 ntBASIC13.85□□□□□ -0.19
CCL1P22362 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL1P22362 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL1P22362 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.85□□□□□ -0.19
CCL1P22362 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL1P22362 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL1P22362 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL1P22362 MIR4313-201ENST00000580760 101 ntBASIC13.85□□□□□ -0.19
CCL1P22362 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL1P22362 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL1P22362 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL1P22362 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CCL1P22362 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.85□□□□□ -0.19
CCL1P22362 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL1P22362 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCL1P22362 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL1P22362 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL1P22362 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL1P22362 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL1P22362 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL1P22362 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCL1P22362 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CCL1P22362 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL1P22362 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCL1P22362 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL1P22362 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL1P22362 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 AP003680.1-201ENST00000598970 3660 ntBASIC13.84□□□□□ -0.19
CCL1P22362 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCL1P22362 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCL1P22362 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.84□□□□□ -0.19
CCL1P22362 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.84□□□□□ -0.19
CCL1P22362 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.84□□□□□ -0.19
CCL1P22362 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.84□□□□□ -0.19
CCL1P22362 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL1P22362 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL1P22362 AC092902.6-201ENST00000641783 218 ntBASIC13.84□□□□□ -0.19
CCL1P22362 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCL1P22362 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
CCL1P22362 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL1P22362 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL1P22362 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCL1P22362 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CCL1P22362 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL1P22362 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL1P22362 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.83□□□□□ -0.19
CCL1P22362 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCL1P22362 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.83□□□□□ -0.19
CCL1P22362 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CCL1P22362 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms