Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3BP20337 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3BP20337 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3BP20337 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3BP20337 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3BP20337 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB3BP20337 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3BP20337 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB3BP20337 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3BP20337 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAB3BP20337 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3BP20337 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3BP20337 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3BP20337 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3BP20337 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3BP20337 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RAB3BP20337 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 AC090616.6-203ENST00000579186 1945 ntBASIC14.18□□□□□ -0.14
RAB3BP20337 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3BP20337 AC104819.1-201ENST00000504587 486 ntBASIC14.18□□□□□ -0.14
RAB3BP20337 AC107918.2-201ENST00000530817 355 ntBASIC14.18□□□□□ -0.14
RAB3BP20337 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB3BP20337 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3BP20337 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3BP20337 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
RAB3BP20337 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3BP20337 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3BP20337 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RAB3BP20337 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3BP20337 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3BP20337 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
RAB3BP20337 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB3BP20337 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB3BP20337 AC026748.1-201ENST00000624349 3251 ntBASIC14.17□□□□□ -0.14
RAB3BP20337 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3BP20337 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB3BP20337 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB3BP20337 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3BP20337 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAB3BP20337 PTCHD3P3-201ENST00000403073 906 ntBASIC14.17□□□□□ -0.14
RAB3BP20337 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB3BP20337 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB3BP20337 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 AP002414.4-201ENST00000589764 1148 ntBASIC14.17□□□□□ -0.14
RAB3BP20337 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB3BP20337 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RAB3BP20337 AC105250.1-201ENST00000509378 2057 ntBASIC14.17□□□□□ -0.14
RAB3BP20337 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3BP20337 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB3BP20337 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB3BP20337 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3BP20337 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms