Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT4P19013 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 RNU1-129P-201ENST00000384064 167 ntBASIC16.22■□□□□ 0.19
KRT4P19013 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
KRT4P19013 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT4P19013 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 KRT18P31-201ENST00000506277 1292 ntBASIC16.22■□□□□ 0.19
KRT4P19013 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT4P19013 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.22■□□□□ 0.19
KRT4P19013 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT4P19013 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT4P19013 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.22■□□□□ 0.19
KRT4P19013 U1.21-201ENST00000580816 167 ntBASIC16.22■□□□□ 0.19
KRT4P19013 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT4P19013 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 AC106881.1-201ENST00000605849 3329 ntBASIC16.22■□□□□ 0.19
KRT4P19013 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT4P19013 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
KRT4P19013 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 TCAF2P1-201ENST00000291129 2421 ntBASIC16.21■□□□□ 0.19
KRT4P19013 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
KRT4P19013 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KRT4P19013 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT4P19013 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT4P19013 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 AC136632.2-201ENST00000512891 861 ntBASIC16.21■□□□□ 0.19
KRT4P19013 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT4P19013 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 MIR4515-201ENST00000584082 81 ntBASIC16.21■□□□□ 0.19
KRT4P19013 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 AC092127.1-201ENST00000567093 3455 ntBASIC16.21■□□□□ 0.19
KRT4P19013 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT4P19013 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
KRT4P19013 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KRT4P19013 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT4P19013 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT4P19013 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT4P19013 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
KRT4P19013 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT4P19013 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms