Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.19□□□□□ -0.14
ATF1P18846 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 TCAF2P1-201ENST00000291129 2421 ntBASIC14.19□□□□□ -0.14
ATF1P18846 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ATF1P18846 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
ATF1P18846 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.19□□□□□ -0.14
ATF1P18846 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.19□□□□□ -0.14
ATF1P18846 AC018712.1-201ENST00000455767 687 ntBASIC14.19□□□□□ -0.14
ATF1P18846 AC108073.2-201ENST00000464002 357 ntBASIC14.19□□□□□ -0.14
ATF1P18846 AF186996.4-201ENST00000467186 377 ntBASIC14.19□□□□□ -0.14
ATF1P18846 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.19□□□□□ -0.14
ATF1P18846 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.19□□□□□ -0.14
ATF1P18846 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.19□□□□□ -0.14
ATF1P18846 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.19□□□□□ -0.14
ATF1P18846 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.19□□□□□ -0.14
ATF1P18846 OR7E47P-204ENST00000575924 449 ntBASIC14.19□□□□□ -0.14
ATF1P18846 MIR4515-201ENST00000584082 81 ntBASIC14.19□□□□□ -0.14
ATF1P18846 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.19□□□□□ -0.14
ATF1P18846 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ATF1P18846 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.19□□□□□ -0.14
ATF1P18846 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
ATF1P18846 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.19□□□□□ -0.14
ATF1P18846 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.19□□□□□ -0.14
ATF1P18846 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.19□□□□□ -0.14
ATF1P18846 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
ATF1P18846 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.18□□□□□ -0.14
ATF1P18846 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.18□□□□□ -0.14
ATF1P18846 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.18□□□□□ -0.14
ATF1P18846 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 FAM185BP-201ENST00000443595 716 ntBASIC14.18□□□□□ -0.14
ATF1P18846 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATF1P18846 EMBP1-201ENST00000458200 901 ntBASIC14.18□□□□□ -0.14
ATF1P18846 KRT18P56-201ENST00000507275 550 ntBASIC14.18□□□□□ -0.14
ATF1P18846 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.18□□□□□ -0.14
ATF1P18846 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 AC012640.2-201ENST00000561606 901 ntBASIC14.18□□□□□ -0.14
ATF1P18846 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.18□□□□□ -0.14
ATF1P18846 AL121912.1-201ENST00000603683 238 ntBASIC14.18□□□□□ -0.14
ATF1P18846 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.18□□□□□ -0.14
ATF1P18846 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATF1P18846 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.18□□□□□ -0.14
ATF1P18846 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATF1P18846 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.18□□□□□ -0.14
ATF1P18846 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ATF1P18846 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.17□□□□□ -0.14
ATF1P18846 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.17□□□□□ -0.14
ATF1P18846 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms