Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC130P13994 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC130P13994 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC130P13994 BNIP3P1-202ENST00000550043 1585 ntBASIC17.05■□□□□ 0.32
CCDC130P13994 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC130P13994 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC130P13994 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC130P13994 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC130P13994 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC130P13994 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CCDC130P13994 CICP6-201ENST00000457191 2729 ntBASIC17.05■□□□□ 0.32
CCDC130P13994 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC130P13994 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC130P13994 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC130P13994 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC130P13994 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC130P13994 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC130P13994 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC130P13994 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 SPDYE17-201ENST00000412399 783 ntBASIC17.04■□□□□ 0.32
CCDC130P13994 TSSK5P-201ENST00000423978 907 ntBASIC17.04■□□□□ 0.32
CCDC130P13994 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC130P13994 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC130P13994 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC130P13994 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC130P13994 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC130P13994 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC130P13994 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC130P13994 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC130P13994 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC130P13994 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC130P13994 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC130P13994 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCDC130P13994 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC130P13994 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC130P13994 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 AL162727.3-201ENST00000635661 2787 ntBASIC17.03■□□□□ 0.32
CCDC130P13994 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCDC130P13994 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.03■□□□□ 0.32
CCDC130P13994 BCRP1-201ENST00000444246 691 ntBASIC17.03■□□□□ 0.32
CCDC130P13994 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.03■□□□□ 0.32
CCDC130P13994 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC130P13994 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC130P13994 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC130P13994 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC130P13994 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CCDC130P13994 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC130P13994 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC130P13994 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC130P13994 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms