Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.29■□□□□ 0.04
LAMP1P11279 AC073389.1-201ENST00000595595 795 ntBASIC15.29■□□□□ 0.04
LAMP1P11279 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.29■□□□□ 0.04
LAMP1P11279 AC120114.3-201ENST00000611923 658 ntBASIC15.29■□□□□ 0.04
LAMP1P11279 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMP1P11279 AC136621.1-201ENST00000624017 2304 ntBASIC15.29■□□□□ 0.04
LAMP1P11279 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LAMP1P11279 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMP1P11279 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LAMP1P11279 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMP1P11279 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.29■□□□□ 0.04
LAMP1P11279 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMP1P11279 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LAMP1P11279 FOXO1B-201ENST00000504678 1527 ntBASIC15.28■□□□□ 0.04
LAMP1P11279 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
LAMP1P11279 SSR4P1-203ENST00000599569 2260 ntBASIC15.28■□□□□ 0.04
LAMP1P11279 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LAMP1P11279 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.28■□□□□ 0.04
LAMP1P11279 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.28■□□□□ 0.04
LAMP1P11279 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LAMP1P11279 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LAMP1P11279 AL591424.1-201ENST00000442569 1213 ntBASIC15.28■□□□□ 0.04
LAMP1P11279 AC098859.1-201ENST00000502915 1238 ntBASIC15.28■□□□□ 0.04
LAMP1P11279 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.28■□□□□ 0.04
LAMP1P11279 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.28■□□□□ 0.04
LAMP1P11279 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
LAMP1P11279 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.28■□□□□ 0.04
LAMP1P11279 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LAMP1P11279 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LAMP1P11279 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LAMP1P11279 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMP1P11279 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.28■□□□□ 0.04
LAMP1P11279 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.27■□□□□ 0.04
LAMP1P11279 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.27■□□□□ 0.04
LAMP1P11279 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 AC020658.6-201ENST00000623564 1870 ntBASIC15.27■□□□□ 0.04
LAMP1P11279 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.27■□□□□ 0.04
LAMP1P11279 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
LAMP1P11279 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LAMP1P11279 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.27■□□□□ 0.04
LAMP1P11279 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.27■□□□□ 0.04
LAMP1P11279 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
LAMP1P11279 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.27■□□□□ 0.04
LAMP1P11279 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.27■□□□□ 0.04
LAMP1P11279 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.27■□□□□ 0.04
LAMP1P11279 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.27■□□□□ 0.04
LAMP1P11279 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.27■□□□□ 0.04
LAMP1P11279 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LAMP1P11279 SPTSSB-204ENST00000617024 1292 ntBASIC15.27■□□□□ 0.04
LAMP1P11279 FAM197Y3-203ENST00000618346 717 ntBASIC15.27■□□□□ 0.04
LAMP1P11279 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.27■□□□□ 0.04
LAMP1P11279 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LAMP1P11279 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMP1P11279 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LAMP1P11279 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LAMP1P11279 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.27■□□□□ 0.03
LAMP1P11279 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMP1P11279 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
LAMP1P11279 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LAMP1P11279 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMP1P11279 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMP1P11279 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LAMP1P11279 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMP1P11279 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
LAMP1P11279 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
LAMP1P11279 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LAMP1P11279 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMP1P11279 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LAMP1P11279 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms