Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.61□□□□□ -0.39
CD28P10747 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.61□□□□□ -0.39
CD28P10747 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 SPDYE18-201ENST00000510091 1050 ntBASIC12.61□□□□□ -0.39
CD28P10747 DOC2GP-202ENST00000514950 1163 ntBASIC12.61□□□□□ -0.39
CD28P10747 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.61□□□□□ -0.39
CD28P10747 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
CD28P10747 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.61□□□□□ -0.39
CD28P10747 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.61□□□□□ -0.39
CD28P10747 AL033527.5-202ENST00000641632 1098 ntBASIC12.61□□□□□ -0.39
CD28P10747 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CD28P10747 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.61□□□□□ -0.39
CD28P10747 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CD28P10747 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.61□□□□□ -0.39
CD28P10747 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CD28P10747 AC105020.1-201ENST00000435356 2205 ntBASIC12.61□□□□□ -0.39
CD28P10747 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.61□□□□□ -0.39
CD28P10747 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.6□□□□□ -0.39
CD28P10747 AL139010.1-201ENST00000454878 894 ntBASIC12.6□□□□□ -0.39
CD28P10747 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 ZNF890P-202ENST00000530367 1156 ntBASIC12.6□□□□□ -0.39
CD28P10747 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.6□□□□□ -0.39
CD28P10747 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.6□□□□□ -0.39
CD28P10747 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 NORAD-201ENST00000565493 5339 ntBASIC12.6□□□□□ -0.39
CD28P10747 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CD28P10747 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.6□□□□□ -0.39
CD28P10747 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD28P10747 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CD28P10747 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.59□□□□□ -0.39
CD28P10747 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
CD28P10747 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.59□□□□□ -0.39
CD28P10747 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD28P10747 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms